Report of the National Influenza Surveillance Scheme, 2020–2021

Authors

  • Ms Suzie Whitehead Public Health Division, Australian Centre for Disease Control, Canberra, Australian Capital Territory, Australia
  • Ms Jenna Hassall Public Health Division, Australian Centre for Disease Control, Canberra, Australian Capital Territory, Australia
  • Ms Lauren Kutzner Public Health Division, Australian Centre for Disease Control, Canberra, Australian Capital Territory, Australia
  • Ms Tracy Tsang Public Health Division, Australian Centre for Disease Control, Canberra, Australian Capital Territory, Australia
  • Dr Shweta Singhal Public Health Division, Australian Centre for Disease Control, Canberra, Australian Capital Territory, Australia

DOI:

https://doi.org/10.33321/cdi.2026.50.021

Keywords:

influenza, surveillance, influenza-like illness, sentinel surveillance

Abstract

This report describes influenza surveillance activities in Australia in 2020 to 2021 and the impact which coronavirus disease 2019 (COVID-19) related public health and social measures (PHSMs) had on influenza notifications. Data were extracted from several sources constituting the National Influenza Surveillance Scheme.

In 2020 and 2021, a range of PHSMs were instituted across Australia to reduce the spread of COVID-19. These measures had a substantial impact on influenza circulation during this time. Laboratory-confirmed influenza notifications in these years were the lowest reported to the National Notifiable Diseases Surveillance System (NNDSS) since influenza became nationally notifiable in 2001. Laboratory-confirmed influenza notification rates varied greatly between states and territories in the two-year reporting period, likely influenced by differences in the PHSMs instituted across the country. Higher influenza notification rates were observed in the 0–4 and 5–9 year age groups in 2020, while the notification rates in 2021 were very low across all age groups. In 2020, eighty-seven percent of laboratory-confirmed influenza notifications were influenza A (91.1% influenza A(unsubtyped); 7.7% A(H1N1)pdm09; 1.2% A(H3N2)) and 12.6% were influenza B. In 2021, seventy-two percent of laboratory-confirmed influenza notifications were influenza A (91.1% influenza A(unsubtyped); 8.3% A(H3N2); 1.3% A(H1N1)pdm09) and 17.3% were influenza B.

Very low influenza activity was also observed in community sentinel surveillance systems. However, slight increases in influenza-like illness, still at very low rates compared to previous years, were reported by sentinel general practices, with rises observed in mid-June in both 2020 and 2021. Very few laboratory-confirmed influenza sentinel hospital admissions and deaths were reported in 2020 and 2021.

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References

World Health Organization (WHO). Influenza (seasonal). [Online fact sheet.] Geneva: WHO; 28 February 2025. Available from: https://www.who.int/news-room/fact-sheets/detail/influenza-(seasonal).

Paules C, Subbarao K. Influenza. Lancet. 2017;390(10095):697–708. doi: https://doi.org/10.1016/S0140-6736(17)30129-0.

Communicable Diseases Epidemiology Surveillance Section. Report of the National Influenza Surveillance Scheme, 2011 to 2018. Commun Dis Intell (2018). 2022;46. doi: https://doi.org/10.33321/cdi.2022.46.12.

Hassall J, Kutzner L, Whitehead S, Tsang T, Hogarth F, St George S. Report of the National Influenza Surveillance Scheme, 2019. Commun Dis Intell (2018). 2026;50. doi: https://doi.org/10.33321/cdi.2026.50.020.

WHO. WHO Director-General’s opening remarks at the media briefing on COVID-19 – 11 March 2020. [Online transcript.] Geneva: WHO; 11 March 2020. Available from: https://www.who.int/news-room/speeches/item/who-director-general-s-opening-remarks-at-the-media-briefing-on-covid-19---11-march-2020.

Sullivan SG, Carlson S, Cheng AC, Chilver MB, Dwyer DE, Irwin M et al. Where has all the influenza gone? The impact of COVID-19 on the circulation of influenza and other respiratory viruses, Australia, March to September 2020. Euro Surveill. 2020;25(47):2001847. doi: https://doi.org/10.2807/1560-7917.ES.2020.25.47.2001847.

Bright A, Glynn-Robinson AJ, Kane S, Wright R, Saul N. The effect of COVID-19 public health measures on nationally notifiable diseases in Australia: preliminary analysis. Commun Dis Intell (2018). 2020;44. doi: https://doi.org/10.33321/cdi.2020.44.85.

Department of the Prime Minister and Cabinet. COVID-19 Response Inquiry Report. Canberra: Australian Government Department of the Prime Minister and Cabinet; 29 October 2024. Available from: https://www.pmc.gov.au/resources/covid-19-response-inquiry-report.

World Health Organization (WHO) Collaborating Centre for Reference and Research on Influenza (CCRRI). WHO GISRS Surveillance; WHO Global Influenza Surveillance and Response System (GISRS) Surveillance and Vaccine Development. [Webpage.] Melbourne: WHO CCRRI; 2025. Available from: http://www.influenzacentre.org/Centre_Activities_WHO_GISRS_Surveillance.html.

Desborough J, Hall Dykgraaf S, de Toca L, Davis S, Roberts L, Kelaher C et al. Australia’s national COVID-19 primary care response. Med J Aust. 2020;213(3):104–6.e1. doi: https://doi.org/10.5694/mja2.50693.

Caini S, Meijer A, Nunes MC, Henaff L, Zounon M, Boudewijns B et al. Probable extinction of influenza B/Yamagata and its public health implications: a systematic literature review and assessment of global surveillance databases. Lancet Microbe. 2024;5(8):100851. doi: https://doi.org/10.1016/S2666-5247(24)00066-1.

Australian Technical Advisory Group on Immunisation (ATAGI). Statement on the administration of seasonal influenza vaccines in 2020. Canberra: Australian Government Department of Health, Disability and Ageing; March 2020. Available from: https://www.health.gov.au/sites/default/files/documents/2020/03/atagi-advice-on-seasonal-influenza-vaccines-in-2020.pdf.

Australian Government Department of Health, Disability and Ageing, Therapeutic Goods Administration (TGA). 2020 seasonal influenza vaccines: Information for consumers and health professionals. [Internet.] Canberra: TGA; 15 May 2020. Available from: https://www.tga.gov.au/safety/safety-monitoring-and-information/safety-alerts/2020-seasonal-influenza-vaccines.

ATAGI. Statement on the administration of seasonal influenza vaccines in 2021 – updated December 2021. Canberra: Australian Government Department of Health, Disability and Ageing; December 2021. Available from https://www.health.gov.au/sites/default/files/documents/2021/12/atagi-advice-on-seasonal-influenza-vaccines-in-2021-december-2021-update.pdf.

TGA. 2021 seasonal influenza vaccines. Information for consumers and health professionals. [Internet.] Canberra: TGA; 13 April 2021. Available from: https://www.tga.gov.au/safety/safety-monitoring-and-information/safety-alerts/2021-seasonal-influenza-vaccines.

Kerr AG, Carlson SJ, Baldwin Z, Innes RJ, Howard ZL, Bennett M et al. FluTracking: Weekly online community-based surveillance of respiratory illness in Australia, 2020–2022 Report. Commun Dis Intell (2018). 2025;49. doi: https://doi.org/10.33321/cdi.2025.49.024.

Australian Bureau of Statistics (ABS). Causes of Death, Australia: Reference period 2020. [Webpage.] Canberra: ABS; 29 September 2021. Available from: https://www.abs.gov.au/statistics/health/causes-death/causes-death-australia/2020.

ABS. Causes of Death, Australia: Reference period 2021. [Webpage.] Canberra: ABS; 19 October 2022. Available from: https://www.abs.gov.au/statistics/health/causes-death/causes-death-australia/2021.

Pendrey CG, Strachan J, Peck H, Aziz A, Moselen J, Moss R et al. The re-emergence of influenza following the COVID-19 pandemic in Victoria, Australia, 2021 to 2022. Euro Surveill. 2023;28(37):2300118. doi: https://doi.org/10.2807/1560-7917.ES.2023.28.37.2300118.

Karlsson EA, Mook PAN, Vandemaele K, Fitzner J, Hammond A, Cozza V et al. Review of global influenza circulation, late 2019 to 2020, and the impact of the COVID-19 pandemic on influenza circulation. WHO Weekly Epidemiological Record. 2021(25):241–6. Available from: https://iris.who.int/server/api/core/bitstreams/5e60298d-98d5-4965-9ea5-17df383657c2/content.

Bonacina F, Boëlle PY, Colizza V, Lopez O, Thomas M, Poletto C. Global patterns and drivers of influenza decline during the COVID-19 pandemic. Int J Infect Dis. 2023;128:132–9. doi: https://doi.org/10.1016/j.ijid.2022.12.042.

Parliament of Australia. Appendix C. Timeline of key events. Report 494: Inquiry into the Department of Foreign Affairs and Trade’s crisis management arrangements. [Webpage.] Canberra: Parliament of Australia Joint Committee of Public Accounts and Audit; 2023. Available from: https://www.aph.gov.au/Parliamentary_Business/Committees/Joint/Public_Accounts_and_Audit/DFATcrisismanagement/Report_494_Inquiry_into_the_Department_of_Foreign_Affairs_and_Trades_crisis_management_arrangem/C_Timeline_of_key_events.

Hull B, Hendry A, Dey A, Brotherton J, Macartney K, Beard F. Annual Immunisation Coverage Report 2021. Commun Dis Intell (2018). 2023;47. doi: https://doi.org/10.33321/cdi.2023.47.47.

Gilbert AS, Garratt SM, Brijnath B, Ostaszkiewicz J, Batchelor F, Dang C et al. “Keeping our distance”: Older adults’ experiences during year one of the COVID-19 pandemic and lockdown in Australia. J Aging Stud. 2023;67:101170. doi: https://doi.org/10.1016/j.jaging.2023.101170.

Parums DV. A decline in influenza during the COVID-19 pandemic and the emergence of potential epidemic and pandemic influenza viruses. Med Sci Monit. 2021;4(27):e934949. doi: https://doi.org/10.12659/MSM.934949.

WHO. Recommended composition of influenza virus vaccines for use in the 2022 southern hemisphere influenza season. Geneva: WHO; 24 September 2021. Available from: https://www.who.int/publications/m/item/recommended-composition-of-influenza-virus-vaccines-for-use-in-the-2022-southern-hemisphere-influenza-season.

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Published

25/08/26

How to Cite

Whitehead, Suzie, Jenna Hassall, Lauren Kutzner, Tracy Tsang, and Shweta Singhal. 2026. “Report of the National Influenza Surveillance Scheme, 2020–2021”. Communicable Diseases Intelligence 50 (August). https://doi.org/10.33321/cdi.2026.50.021.